ADASTRA v1.6.10
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rs331161
chr3:78857684
C
>
G
Sequence
cgtggccagaaatctgtgttttat[C/G]aagccctccaggtgacgctggtgc
ASB in cell types
foreskin keratinocyte
MCF7 (Invasive ductal breast carcinoma)
GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.96
0.37
7.3·10
-8
1.00
1.55
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Muscle_Skeletal
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)