rs331574 chr5:95162450 A>G
- Sequence
tgttaaatggaagaaaagtcatgt[A/G]acttcctcttttagattatttaca
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ERF_HUMAN FOXA1_HUMAN ERG_HUMAN RAD51_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERF_HUMAN | -3.13 | 1.65 | 2.50 | n/a | n/a | |||
| FOXA1_HUMAN | 0.37 | 1.82 | 1.74 | n/a | No Hit | |||
| ERG_HUMAN | -1.09 | 1.99 | 2.00 | 0.77 | Weak Concordant | |||
| RAD51_HUMAN | n/a | 1.91 | 1.33 | n/a | n/a | |||
| ANDR_HUMAN | 0.33 | 0.79 | 1.64 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, infant head circumference, total cholesterol