ADASTRA v1.6.10
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rs33175
chr12:30840904
G
>
A
Sequence
ttggtgggagtgtctaatgcaagt[G/A]agcaatgaggtcagctagcaatca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RFX1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN
-2.30
2.10
1.00
2.5·10
-3
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Artery_Aorta
,
Brain_Cerebellum
,
Heart_Left_Ventricle
,
Lung
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)