rs332258 chr15:64095853 G>C
- Sequence
cgcagcctcagctggccgggtgcc[G/C]ccccgcccccagcgcctaagcccc
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- NRF1_HUMAN GABP1_HUMAN ZFX_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 1.34 | 0.26 | 1.81 | n/a | No Hit | |||
| GABP1_HUMAN | 1.87 | -2.47 | 1.67 | n/a | n/a | |||
| ZFX_HUMAN | -0.32 | 1.18 | 1.26 | n/a | No Hit | |||
| MEIS2_HUMAN | 2.45 | -3.72 | 2.00 | n/a | No Hit | |||
| HDAC1_HUMAN | 1.74 | -1.21 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 9