rs332425 chr19:6801942 C>A
- Sequence
tgggtgctgatttgcatatgggca[C/A]gatgccagcacagtgggtgcccgc
- ASB in cell types
- GM12878 (female B-cells) Jurkat (T-cells) periferal blood macrophages
- ASB for transcription factors
- COE1_HUMAN GABPA_HUMAN PO2F2_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COE1_HUMAN | 1.33 | -1.15 | 1.33 | n/a | No Hit | |||
| GABPA_HUMAN | 1.87 | -1.55 | 1.50 | n/a | No Hit | |||
| PO2F2_HUMAN | 1.80 | -1.59 | 1.33 | n/a | No Hit | |||
| SPI1_HUMAN | 1.51 | 0.30 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP anti-tnf treatment response in rheumatoid arthritis (by das-28 score change at 3 months), college completion