ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs332426
chr19:6801955
G
>
A
Sequence
gcatatgggcacgatgccagcaca[G/A]tgggtgcccgcctcttcctggagg
ASB in cell types
GM12878 (female B-cells)
periferal blood macrophages
ASB for transcription factors
COE1_HUMAN
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COE1_HUMAN
1.74
-1.50
9.7·10
-4
1.00
1.33
n/a
No Hit
SPI1_HUMAN
1.36
-0.36
0.01
1.00
1.71
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
mean platelet volume
GRASP
anti-tnf treatment response in rheumatoid arthritis (by das-28 score change at 3 months)
,
college completion
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)