rs333192 chr1:21750045 T>C
- Sequence
tcttcagcctattctcagcaccca[T/C]agttatcccttaaaacagactgta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN ARI1B_HUMAN EGR1_HUMAN TAL1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | n/a | 0.46 | 1.50 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 0.57 | 1.33 | n/a | n/a | |||
| EGR1_HUMAN | -2.94 | 1.29 | 1.44 | n/a | No Hit | |||
| TAL1_HUMAN | -0.66 | 0.95 | 1.56 | n/a | No Hit | |||
| NCOR1_HUMAN | -0.55 | 0.73 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood