ADASTRA v1.6.10
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rs333297
chr3:124659539
C
>
G
Sequence
gttctgagctaggggtagagctag[C/G]ggttctgtctccaccacactgtcc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN
COE1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN
2.25
-2.49
2.9·10
-4
1.00
1.33
n/a
No Hit
COE1_HUMAN
1.64
n/a
0.02
1.00
1.33
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
crohns disease, combined control dataset
,
irritible bowel syndrome
GTEx eQTL
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Pancreas
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)