rs333340 chr3:124607378 T>C
- Sequence
gcattgaaaatgagccaagatata[T/C]actgaatcactgtggttacttcta
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP (prostate carcinoma) HEK293 (embryonic kidney) liver
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN NFIA_HUMAN FOXA3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | n/a | 3.06 | 1.33 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.52 | 1.68 | 1.40 | n/a | No Hit | |||
| NFIA_HUMAN | -1.97 | 1.79 | 1.33 | n/a | No Hit | |||
| FOXA3_HUMAN | -1.91 | 2.07 | 1.33 | n/a | No Hit | |||
| FOXP1_HUMAN | n/a | 1.85 | 1.33 | n/a | No Hit |
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