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rs333557 chr15:65971036 C>T

Sequence
agtaagtactctcacatgggtaca[C/T]agtaaagtgctgagaagacataag
ASB in cell types
K562 (myelogenous leukemia) VCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.23 0.31 5.1·10-41.00 1.52 -1.01 Weak Concordant
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Motif analysis

FOXA1_HUMAN Weak Concordant
FOXA1_HUMAN pic

Genetic associations

GRASP alzheimers disease infant head circumference lp-pla2 activity premature ovarian failure resistance to kuru in aged women despite likely exposure

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