ADASTRA v1.6.10
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rs333713
chr1:185594286
G
>
A
Sequence
ggccaatggtaggtatcatgtcct[G/A]gtgccctctgatgcagcctgccac
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
R3/R4 erythroid cells
ASB for transcription factors
GATA1_HUMAN
TAL1_HUMAN
KLF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN
1.59
-0.44
0.01
1.00
1.83
n/a
No Hit
TAL1_HUMAN
1.95
-1.43
0.04
1.00
2.00
n/a
No Hit
KLF1_HUMAN
2.01
n/a
0.04
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
fasting insulin
,
hdl cholesterol
,
homa-ir
,
irritible bowel syndrome
,
triglycerides change with statins
,
waist circumference in controls
,
years of education
GTEx eQTL
Artery_Tibial
,
Heart_Atrial_Appendage
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)