rs334048 chr2:178152266 T>A
- Sequence
gtttttgtgctgcagtagtggagt[T/A]gagtagttgcaacagaagttgtac
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.99 | 0.02 | 1.90 | n/a | No Hit | |||
| CEBPA_HUMAN | 2.15 | -2.75 | 2.00 | n/a | No Hit |
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