rs334122 chr2:178191078 G>A
- Sequence
aaaaaaaaaaaaaaaagacattac[G/A]tcacatttgtgggaggagttggag
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293T (embryonic kidney) HEK293 (embryonic kidney)
- ASB for transcription factors
- ATF2_HUMAN ZBT17_HUMAN ZN629_HUMAN ZN384_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.43 | n/a | 2.00 | -0.03 | Weak Concordant | |||
| ZBT17_HUMAN | 1.98 | -2.01 | 1.33 | n/a | No Hit | |||
| ZN629_HUMAN | 1.75 | -1.78 | 1.33 | n/a | n/a | |||
| ZN384_HUMAN | 2.29 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
