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rs33565 chr5:112969616 C>T

Sequence
gactcatgtgacctgcagctagtg[C/T]gcagttccatgggggaaatggaac
ASB in cell types
GM12878 (female B-cells) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.80 n/a 2.1·10-31.00 2.50 n/a No Hit
FOXK2_HUMAN -1.87 2.10 1.004.0·10-3 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) diastolic blood pressure (dbp) hdl cholesterol systolic blood pressure (sbp) triglycerides
GTEx eQTL Adipose_Visceral_Omentum Colon_Transverse Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Testis

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