ADASTRA v1.6.10
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rs33565
chr5:112969616
C
>
T
Sequence
gactcatgtgacctgcagctagtg[C/T]gcagttccatgggggaaatggaac
ASB in cell types
GM12878 (female B-cells)
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
FOXK2_HUMAN
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View in UCSC Genome Browser
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
1.80
n/a
2.1·10
-3
1.00
2.50
n/a
No Hit
FOXK2_HUMAN
-1.87
2.10
1.00
4.0·10
-3
1.33
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
diastolic blood pressure (dbp)
,
hdl cholesterol
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Adipose_Visceral_Omentum
,
Colon_Transverse
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Small_Intestine_Terminal_Ileum
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)