rs336484 chr5:34839006 G>T
- Sequence
agttttggggcgagccggaggccg[G/T]gcgcgtctaacctgcggggaaggg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- RFX1_HUMAN ZBT40_HUMAN GABPA_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -0.18 | 0.72 | 1.33 | n/a | No Hit | |||
| ZBT40_HUMAN | 0.78 | 1.92 | 1.33 | n/a | n/a | |||
| GABPA_HUMAN | 0.01 | 1.06 | 1.50 | n/a | No Hit | |||
| HDAC1_HUMAN | -0.79 | 1.47 | 1.33 | n/a | n/a | |||
| PRD10_HUMAN | 2.32 | n/a | 3.00 | n/a | n/a |
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