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rs337188 chr1:220748603 G>C

Sequence
ccggccctggcccaggtggctcgg[G/C]gtcgccgcgctaggactggccgcc
ASB in cell types
HCT-116 (colon carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma) 0.98 1.40 1.000.03 1.22
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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