rs337620 chr4:38621553 G>C
- Sequence
tcggggaagttaaccttgctttct[G/C]tcaatgtgtgctgcccctggatct
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN MNT_HUMAN FOXA1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.36 | 0.57 | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | 1.55 | -1.06 | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | 0.95 | -0.35 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 1.68 | -0.72 | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | 1.39 | -0.02 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 5