rs339087 chr7:128783287 G>C
- Sequence
gctccgcaatgagctacggaggag[G/C]aggagagaactcaggagcaatgcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- CSN2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CSN2_HUMAN | -2.11 | 2.10 | 1.50 | n/a | n/a |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Spleen, Testis