rs339432 chr5:13977095 C>T
- Sequence
ttgctaaggagggacgcagaggtg[C/T]tctggaaatgtttcattacagtgt
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.97 | -0.24 | 1.94 | n/a | n/a | |||
| RAD21_HUMAN | 1.18 | 0.64 | 1.92 | n/a | n/a |
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