rs340190 chr4:85418276 C>T
- Sequence
aaatacaggcagtaggttaactaa[C/T]ccctacctatgccagaagaaggcg
- ASB in cell types
- pancreas GM12878 (female B-cells) upper lobe of left lung GM12873 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN ZBTB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.57 | 1.00 | 1.44 | n/a | No Hit | |||
| ZBTB2_HUMAN | -1.91 | 1.97 | 1.33 | n/a | n/a |
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