rs34030 chr5:125965227 A>G
- Sequence
ggccaaacacttctaccttaaggg[A/G]gctataaaacatttcttctcttca
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.89 | -0.95 | 1.77 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.96 | -0.59 | 1.94 | n/a | No Hit |
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