ADASTRA v1.6.10
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rs34041
chr7:12941759
G
>
T
Sequence
ggctgatccatgtacttaatgaag[G/T]acacgtgaaaactcagccgggaac
ASB in cell types
HepG2 (hepatoblastoma)
ZR-75-1 (invasive ductal carcinoma)
CWR22 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
0.34
1.10
1.00
0.02
1.95
0.10
Weak Concordant
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Motif analysis
ANDR_HUMAN
Weak Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
parkinsons disease
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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