rs34053337 chr10:13220050 A>G
- Sequence
tgttttgcttttttaaagcaagcc[A/G]ttcttggtttttgacatctgaaaa
- ASB in cell types
- K562 (myelogenous leukemia) NB69 (neuroblastoma) foreskin keratinocyte thyroid gland
- ASB for transcription factors
- CTCF_HUMAN CTBP1_HUMAN KDM1A_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.42 | 1.21 | 1.52 | n/a | No Hit | |||
| CTBP1_HUMAN | -1.96 | 2.29 | 1.67 | n/a | n/a | |||
| KDM1A_HUMAN | -1.41 | 1.64 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | -3.03 | 2.36 | 2.00 | n/a | No Hit |
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