ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs34067029
chr17:31544390
A
>
G
Sequence
cttgcagctgcatccagctgaggc[A/G]tcagctgagctggaaggtcccaga
ASB in cell types
K562 (myelogenous leukemia)
ICN12 (primary pre-B acute lymphomablastic leukemia)
ASB for transcription factors
MEIS2_HUMAN
PKNX1_HUMAN
TFE2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEIS2_HUMAN
n/a
2.79
1.00
2.5·10
-4
2.00
n/a
No Hit
PKNX1_HUMAN
-0.17
2.24
0.81
5.0·10
-3
1.75
n/a
No Hit
TFE2_HUMAN
1.72
-2.01
0.04
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Heart_Left_Ventricle
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)