rs342055 chr2:20452647 G>C
- Sequence
agtaaaacacagcctctcctcttc[G/C]ctccctgttcacaaaacaaggagc
- ASB in cell types
- epithelial cell of prostate HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.01 | 0.43 | 1.56 | n/a | No Hit | |||
| RAD21_HUMAN | 0.96 | 0.04 | 1.60 | n/a | n/a |
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