rs342983 chr7:35425174 T>G
- Sequence
ttttccttgagcgggggagctggg[T/G]ggcaattgttgtttctttttgttt
- ASB in cell types
- SK-N-SH (neuroblastoma) A549 (lung carcinoma) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.15 | 0.40 | 1.52 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, ldl cholesterol change with statins, refractive error, total cholesterol change with statins