rs34304371 chr7:12107874 G>A
- Sequence
ttatgaactgaagaaattctcctg[G/A]tatgcaaagacttgcttgtgtaat
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN CEBPB_HUMAN EP300_HUMAN BCL3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.61 | -0.65 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 2.04 | -1.47 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.56 | -0.23 | 2.00 | n/a | n/a | |||
| BCL3_HUMAN | 1.30 | -1.29 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Ovary, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis