rs343049 chr7:35477847 G>A
- Sequence
aggtgccacctagagccaaaagac[G/A]ccagtgacctagtggtaaagaatc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.23 | -0.14 | 1.30 | -2.94 | Concordant |
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Motif analysis
