ADASTRA v1.6.10
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rs343796
chr1:110766008
A
>
T
Sequence
tttaaaattatgtgtttgattttt[A/T]aaaaatctaaagtagaaaagggag
ASB in cell types
foreskin keratinocyte
PC9 (lung adenocarcinoma)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
-0.59
1.59
1.00
5.6·10
-3
1.83
PC9 (lung adenocarcinoma)
-0.65
1.36
1.00
6.8·10
-3
1.50
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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