rs343818 chr1:110799077 C>T
- Sequence
taaaagttaaagaggcagggcagg[C/T]gcacttccagaagctcagcacaat
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 0.05 | 1.62 | 2.00 | |||
| LNCaP (prostate carcinoma) | 1.22 | 0.01 | 1.48 | |||
| LNCaP C4-2 (prostate carcinoma) | 1.19 | -1.01 | 1.33 |
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