ADASTRA v1.6.10
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adastra.autosome.org
rs34386
chr5:108176202
A
>
G
Sequence
ctaaatccatgggcttataacgcc[A/G]tattcatcatcatataaaatgtat
ASB in cell types
LNCaP (prostate carcinoma)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma)
0.10
0.67
0.84
0.03
1.46
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5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
ldl cholesterol
,
lp-pla2 activity
,
obesity with early age of onset (age >2)
,
years of education
GTEx eQTL
Heart_Atrial_Appendage
,
Muscle_Skeletal
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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