rs34400101 chr2:75430691 G>C
- Sequence
gtcctgagaacacgtgcccaaggg[G/C]gttgtgtcaggcctctgagcccaa
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- COT1_HUMAN ARNT_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 1.84 | -1.73 | 1.33 | n/a | No Hit | |||
| ARNT_HUMAN | 2.02 | -1.75 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.29 | -0.65 | 1.33 | n/a | No Hit |
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