rs34467595 chr6:110981936 C>G
- Sequence
cggggcaaaaatccgtaaccaaga[C/G]aacagggcgcgattccaatcaaga
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- BMI1_HUMAN JUN_HUMAN ZBT40_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BMI1_HUMAN | 3.38 | n/a | 1.33 | n/a | n/a | |||
| JUN_HUMAN | 0.16 | 0.92 | 1.13 | n/a | No Hit | |||
| ZBT40_HUMAN | 0.36 | -0.36 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | -1.37 | 1.60 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid