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rs346317 chr6:79873053 G>A

Sequence
atatctaaggttaaatcttcactg[G/A]ttgggcaggtgagtagttgatata
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN FOS_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 3.40 n/a 3.1·10-121.00 1.33 n/a No Hit
FOS_HUMAN 1.96 -1.64 0.011.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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