rs34695094 chr1:153749706 T>C
- Sequence
cagtctcttcttaccagataggtc[T/C]ttgttcctttttactgtcctgggt
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN SPI1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.91 | -0.24 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 0.80 | -0.11 | 2.09 | n/a | n/a | |||
| SPI1_HUMAN | 1.65 | -1.52 | 2.00 | -0.26 | Weak Concordant | |||
| CTCF_HUMAN | 0.69 | 0.26 | 1.47 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Skin_Not_Sun_Exposed_Suprapubic