rs34717241 chr7:138876094 T>C
- Sequence
gcaatcacatttatctcatcttca[T/C]tgtatatcaccagcacctgaccac
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ATF3_HUMAN GATA3_HUMAN ARI1B_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -1.98 | 2.13 | 1.50 | n/a | No Hit | |||
| GATA3_HUMAN | 0.94 | 1.98 | 2.33 | n/a | No Hit | |||
| ARI1B_HUMAN | -2.25 | 2.04 | 1.50 | n/a | n/a | |||
| MEIS2_HUMAN | -2.45 | 2.08 | 1.50 | n/a | No Hit | |||
| CTBP1_HUMAN | -0.94 | 1.80 | 1.42 | n/a | n/a |
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