rs347245 chr5:73497226 A>G
- Sequence
actgccattttggcctttgtcatt[A/G]ggaaggtaacccacataagcctaa
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.70 | 0.50 | 1.39 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.52 | 1.28 | 1.67 | 3.24 | Concordant |
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Motif analysis
