ADASTRA v1.6.10
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rs348286
chr20:49186756
C
>
T
Sequence
tttttacctcaacaagtagcaatg[C/T]aatttacacttggtaagcacggat
ASB in cell types
GM12878 (female B-cells)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells)
1.53
-1.06
1.8·10
-4
1.00
1.44
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
obesity with early age of onset (age >2)
,
total cholesterol change with statins
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Pancreas
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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