rs348337 chr19:6530645 T>C
- Sequence
ttggcagagagagagaaagatctc[T/C]ttccacccactgcagaggcaatca
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- MNT_HUMAN TIF1A_HUMAN FOXK2_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -1.02 | 2.05 | 2.00 | n/a | n/a | |||
| TIF1A_HUMAN | -1.84 | 2.09 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | -0.83 | 1.56 | 1.78 | n/a | n/a | |||
| HDAC1_HUMAN | -0.84 | 1.75 | 2.00 | n/a | n/a |
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