rs348383 chr19:6552210 T>C
- Sequence
ccggggagctgtcagcctcctccc[T/C]gggccctccctgcagcagccatgt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- REQU_HUMAN PKNX1_HUMAN MEIS2_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | 2.31 | -1.00 | 1.67 | n/a | n/a | |||
| PKNX1_HUMAN | 1.77 | -1.47 | 1.50 | n/a | No Hit | |||
| MEIS2_HUMAN | 2.61 | n/a | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.02 | -1.54 | 1.33 | n/a | n/a | |||
| ATF7_HUMAN | 1.87 | -1.28 | 1.67 | n/a | n/a |
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