rs350150 chr19:933487 G>A
- Sequence
cctcgtccagctgggctctgcctc[G/A]acctctgggcgcggctggggggag
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) CD14+ monocytes sigmoid colon
- ASB for transcription factors
- COT1_HUMAN STAT1_HUMAN ZN449_HUMAN TEAD3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.12 | -0.09 | 1.67 | -3.30 | Concordant | |||
| STAT1_HUMAN | -2.91 | 1.84 | 2.50 | n/a | No Hit | |||
| ZN449_HUMAN | -3.32 | 2.32 | 2.00 | n/a | No Hit | |||
| TEAD3_HUMAN | 1.54 | -1.79 | 1.33 | n/a | n/a |
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Motif analysis
