ADASTRA v1.6.10
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rs351666
chr5:40173300
G
>
C
Sequence
taatagaaatacaaagataaatga[G/C]gcagagttcttgtccttaaggaat
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
0.02
1.02
1.00
0.04
1.37
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (geographic atrophy)
,
aortic valve calcium
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Caudate_basal_ganglia
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)