rs351974 chr19:797079 A>C
- Sequence
ttgcaagatggcggcagcctgggc[A/C]aagcacgcttcccgccgcctgact
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MAX_HUMAN HIC1_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAX_HUMAN | -0.47 | 1.34 | 1.67 | n/a | No Hit | |||
| HIC1_HUMAN | 0.64 | n/a | 1.50 | -4.06 | Concordant | |||
| ATF3_HUMAN | -0.86 | 1.98 | 2.00 | n/a | No Hit |
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Motif analysis
