ADASTRA v1.6.10
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rs352090
chr6:113858197
T
>
G
Sequence
tgggggcacaatggtgtttgggtg[T/G]ctctcgggtttgttgtcgaagctg
ASB in cell types
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells)
0.67
0.36
0.02
0.85
1.33
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5
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Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
hdl cholesterol change with statins
GTEx eQTL
Brain_Putamen_basal_ganglia
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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