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rs352346 chr5:149346258 G>A

Sequence
gggctggaaaccagtcagggcgtt[G/A]gaatcggcgctcttatttaatgag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF4_HUMAN HDAC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF4_HUMAN n/a 2.07 1.000.04 2.00 n/a No Hit
HDAC1_HUMAN -1.77 1.85 1.000.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Brain_Frontal_Cortex_BA9 Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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