ADASTRA v1.6.10
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rs35242457
chr5:80256271
G
>
A
Sequence
gccgagctccggagtcggccgcca[G/A]cctttgggccccacgctccgggtc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
CD14+ monocytes
SUM185PE (ductal breast carcinoma)
ASB for transcription factors
STAT1_HUMAN
KDM5B_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.29
-0.36
2.7·10
-3
1.00
1.75
n/a
No Hit
KDM5B_HUMAN
1.88
-0.18
0.02
1.00
2.33
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)