rs352605 chr5:107557441 C>T
- Sequence
ttcagccacacgctgcctcaggaa[C/T]cacgcagcccactggcagagttga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN GATA3_HUMAN FOXA1_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.33 | 1.50 | 2.61 | n/a | No Hit | |||
| GATA3_HUMAN | -1.02 | 3.31 | 2.67 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.07 | 1.33 | 2.47 | n/a | No Hit | |||
| PKNX1_HUMAN | n/a | 1.87 | 2.00 | n/a | No Hit |
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