rs353237 chr5:149452287 A>G
- Sequence
cctctgcaggctaatttgggccag[A/G]tcagcacaaaacaggcctcagcag
- ASB in cell types
- pancreas A549 (lung carcinoma) cranial neural crest cells
- ASB for transcription factors
- CTCF_HUMAN MAFK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.31 | 1.10 | 1.24 | n/a | No Hit | |||
| MAFK_HUMAN | n/a | 0.86 | 2.00 | 1.58 | Weak Concordant |
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Motif analysis
