rs35404205 chr14:50003394 G>T
- Sequence
gcggggctggctccacgtcgcgcc[G/T]cggcggtttgggctggggagcagc
- ASB in cell types
- A549 (lung carcinoma) breast tumor tissue foreskin keratinocyte
- ASB for transcription factors
- ESR1_HUMAN RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.48 | n/a | 2.50 | n/a | No Hit | |||
| RAD21_HUMAN | -0.53 | 1.00 | 2.05 | n/a | n/a | |||
| SMC3_HUMAN | -0.27 | 0.86 | 2.09 | n/a | n/a | |||
| CTCF_HUMAN | 1.13 | -0.88 | 2.20 | n/a | No Hit | |||
| JUN_HUMAN | -0.04 | 0.91 | 2.06 | n/a | No Hit |
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