rs354075 chr7:149632900 T>C
- Sequence
ccagaggacgaaatcagcttatgt[T/C]attcctctgcaagaaatcctccaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 2.52 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, combined control dataset, gender differentiated, irritible bowel syndrome, ldl cholesterol, prostate cancer, simpson-angus scale
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Minor_Salivary_Gland, Nerve_Tibial, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood